Monday, 10 September 2012

Eskimo


Race to save Alaskan Arctic archaeology

The exquisitely preserved frozen site provides a spectacular insight into the Yup'ik Eskimo culture.
Researchers from the University of Aberdeen are using isotope analyses on recovered Eskimo hair to investigate how humans adapted to rapid climate change in the Arctic village.
The research was discussed at the British Science Festival.
The Yup'ik culture was one of the last contacted societies, but prevailed over an area three times the size of Scotland.
Dig siteAlthough very little had been known about the archaeology of their society, a team from the University of Aberdeen was brought in to help rescue thousands of artifacts that were being eroded out of the ground near the modern village of Quinhagak.
"It's probably the most spectacularly well preserved and valuable site in terms of information content I've ever seen", Dr Rick Knecht, of the University of Aberdeen, said.
"In the first couple of years we found about 7,000 pieces, including items like ivory, woven grass, incredibly well preserved animal remains, animal fur and even human hair."
But the means by which the bounty of discoveries has been released from the soil is also the reason why the site is being eradicated.
"It's preserved by permafrost, and the permafrost is melting due to climate change. As it melts, it exposes the very soft soil to marine erosion: the shoreline retreats and the sites get damaged," explained Dr Knecht, who has been working in Alaska for more than 30 years.
"This year, we were shocked by the amount of destruction. There were artifacts as big as tables thrown up on the bank by a single storm on a high tide.

Clues from climates past
"These storm periods are now lasting weeks longer because of the lack of ice cover. The sea ice cover is at a record low right now and continuing to drop, and every time that happens the site is at more at risk," the researcher told the BBC.
Doll figure
Ironically, the artifacts released by the effects of sea ice reduction may help the scientists better understand how the Yup'ik people adapted to a rapidly changing climate.
The site, known as Nunalleq, was inhabited from around AD 1350 to AD 1650, during which time the area suffered through "The Little Ice Age".
By analyzing extremely well preserved hair found at the site, the team hopes to understand how the people of Nunalleq altered their behaviour with a changing environment.
"Chemical signatures, the isotopes in your food, become present in your hair. You are what you eat," explained Dr Kate Britton, also of the University of Aberdeen.
"By analysing strands of the hair of multiple individuals, we're getting this picture of a very mixed and generalized economy incorporating salmon, caribou and other animal species.

"We can take this evidence and get an idea of what sort of changes were happening in the Bering Sea ecosystem and what sorts of changes were going on in terms of people's subsistence."
"This is in the earlier phase of the site and we're now working on the younger sites which will give us a clear idea of how the people's diet was adapting to changes in climatic conditions which would have affected species availability," she said.
Dr Knecht added: "I think we'll be looking at a story of resilience in the face of very rapid climate change."
Hair sample
As the Arctic sea ice continues to decrease today, many indigenous communities are under threat from changes in the weather, but also from changes in the abundance of subsistence food stocks such as salmon and seals.
Dr Knecht underlined how important the protection of the site was for understanding both the past and how to deal with the future.
"This isn't just an area of cultural importance, but we could also create a predictive model about what to expect in the coming decades," he said.

Sunday, 9 September 2012

all new to The BBC


Desert diversity cut by 'human activities'

Desert shepherd on his camel

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Humans may be destabilising desert ecosystems across the world, according to a new study.
Analysis of the human impact on dryland ecosystems suggests it is "drastically changing" mammal communities.
The scientists believe that activities such as overgrazing livestock lie behind increasing local extinctions and a reduction in diversity.
The work will help to inform future conservation efforts, said lead author Ms Maria Veronica Chillo.
The findings are published in the Journal of Arid Environments and assess how man-made disturbances affect the role of mammals in the ecosystem.
"We report for the first time that in drylands, the effect of human-induced disturbances on mammal functional diversity is negative," said Ms Chillo, a biologist in the Biodiversity Research Group at the Argentinian Institute of Arid Lands Research.

Life in a desert

Camels sit in grassy desert
"Regardless [of] the characteristic of the disturbance, functional diversity is diminished."
The review brought together evidence from 25 studies that evaluated the effect of human-caused disturbances on mammals in arid and semi-arid lands.
A total of 110 species were included in the analysis, spanning a range of animals.
Poaching, logging, grazing, fires and introduction of invasive species were some of the ways that humans were found to have damaged mammal communities.
Although deserts and arid lands may seem to be barren places, they often support complex and fragile ecosystems in which mammals play a key role.
Some mammals dig to build nests or find food, which can bring organic material underground, enriching the soil.
Many herbivores play an important role in maintaining plant life by eating leaves and dispersing seeds.
Life in a desert can be a precarious existence for many mammals. They are constantly exposed to extreme and unpredictable environmental conditions and will be negatively impacted by anything that wipes out the resources they rely on, said Ms Chillo.
White-bellied fat-tailed mouse opossumThe White-bellied fat-tailed mouse opossum is a desert mammal found in South America that feeds mainly on insects
1/4
The "human activities" that the study suggests are most damaging mammals' role in the ecosystem were those that made fundamental changes to habitat type, such as fires or overgrazing that caused grassland to turn into shrubland.
"The most negative effect is seen when disturbances change the conditions of the system [such as something that] modifies the structure or dominant plant species," said Ms Chillo.
The team found that "old fire" from at least a year ago seemed to have a more detrimental effect than "recent fire".
Recent fires simply wipe out plants, whereas new types of vegetation colonise areas scorched by fire that happened earlier. These new plants can be more damaging to desert mammals than no plants at all.
Cars parked at desert camp in sandstormThe threat of sandstorms doesn't prevent humans disturbing desert wildlife
But the team also found that moderate grazing, while it did have a small impact on mammal diversity, had a much more limited effect.
The scientists hope to understand how humans can continue to make use of desert habitats while preserving the mammals' contribution to the ecosystem in areas such as the Monte desert in Argentina.
"The fact that livestock production [one of the main human activities in arid lands] does not represent the most aggressive human activity to mammal functional diversity opens new avenues of research."
The scientists hope that sustainable livestock production is a strategy that might help protect the biodiversity of these areas from human activities in the future.

Paralympics 2012: Oscar Pistorius powers to T44 400m gold


Paralympics 2012: Oscar Pistorius powers to T44 400m gold

South African Oscar Pistorius provided a fitting finale to the Paralympics track and field competition with gold in the last event, the T44 400m.
The 25-year-old, promoted as the face of the Games, went into the final without an individual gold but won in a new Paralympic record of 46.68 seconds.
He finished almost four seconds ahead of Blake Leeper, with fellow American David Prince taking bronze.
Pistorius also won gold in the 4x400m relay and silver in the 200m.

Analysis

"I think it's how the athletics had to end. It was perfect having Oscar Pistorius as the last event. I am pleased for him as an athlete. You could tell he felt despondent about his performances in his other events, so after all the pressure on him, it's a huge amount of relief. It was never going to be easy to do the two events (200m and 400m) back to back. I was a bit disappointed with Alan Oliveira but it proves he can't run a 400m."
Defending champion Pistorius was expected to win the race easily, although at the 200m mark it appeared that Brazil's Alan Oliveira, who stunned the South African in the 200m, might just cause another Paralympics shock.
But Pistorius pulled away from his main rival coming into the final, with 20-year-old Oliveira tying up badly in the home straight and passed by the American pair.
"It is very, very special to me," Pistorius said. "It was the last event of my season, the last event of the London 2012 Paralympic Games (at the stadium). It was just so special.
"It was the 11th time I was able to come out on the track and I just wanted to give the crowd something they could appreciate and take home with them.
"I was very nervous before today's race. I was quite tired but the crowd really kept me going.
"For the first time I was actually thinking about something beside my race coming into the home straight.
"I could hear the crowd, which was very weird and so loud. I thought 'let's just finish off on a good note'."
There was no final flourish for Great Britain's athletes in front of a capacity 80,000 crowd.
Welsh world champion javelin thrower Nathan Stephens finished 12th after two throws and a poor third effort meant a premature end to the 24-year-old's participation in the F57/58 competition.
Jarrow sprinter Hazel Robson finished seventh in the T36 100m - the 33-year-old, who has cerebral palsy, won gold in the event in Sydney.
Britain have dropped from second to third in the overall medals tablebehind Russia, which now has 35 golds to GB's 33, with Ukraine just behind on 32 and Australia on 31 ahead of the final day of competition. China are way out in front with 95 golds.
Elsewhere in the Olympic Stadium, world records fell, including in the crowd-pleasing F46 high jump final. Poland's Maciej Lepiato shattered the previous best of 2.05m with a 2.12 clearance.
Meanwhile, South Africa's Fanie van der Merwe fell over the line to take the T37 100m title. He recorded the same time as China's Liang Yongbin - a world record of 11.51 - but was given gold following a photo finish.
The athletics competition finishes on Sunday with the marathons, with GB's David Weir attempting to win a fourth gold of the Games in the men's T54 event starting at 1130 BST.

Friday, 7 September 2012

logging Liberia's failed logging promises


Liberia's failed logging promises

Dugbeh Forest Logging TruckSome Liberian communities say logging companies are taking resources, but not putting anything back in

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More than 60% of Liberia's virgin rainforest has been granted to logging companies since Nobel Prize winning President, Ellen Johnson Sirleaf, came to power in 2006, according to a Global Witness report. It says the majority of these have been unregulated private contracts. Tamasin Ford reports from Liberia.
A mud road, churned into thick, gloopy soup from the heavy rains, sweeps through Henry Town in Gbarpolu county in the east of Liberia.
It is less than 150km (90 miles) from the capital, Monrovia, but without a single tar road in the county it can take up to 10 hours to reach here in the rainy season.
Old cars and rickety trucks quickly get swallowed up by the metre-high sludge, requiring hours of lifting and digging before other vehicles can pass.
Morris Kamara and his wife, Old Lady, sit on the porch of their small shop in the centre of town. An array of brightly coloured plastic containers hangs from the tin roof.
"This is my shop. As you can see I sell provisions, rubber dishes, mattresses and other things," he said proudly.
Mr Kamara went on to explain how the price of goods is expensive because of the bad roads, adding that this was one of the reasons they had wanted a logging company to operate in the region.
"Logging will bring about some development. They will help to improve the road conditions... I think it's very important for logging to be going on here," he said.
Broken promises?
The chiefdom of Korninga, where Henry Town is located, signed a social agreement with a logging company in 2009 which promised a road, a clinic, a school, land rent and even monthly salaries for the elderly.
The agreements are part of the requirements for firms to be granted a Private Use Permit (PUP).
Anthony Kamara, community activist from Korninga Chiefdom in Gbarpolu at the BODECO logging siteThe residents of Korninga hoped logging firms would bring economic and social benefits
PUPs, which now cover 40% of Liberia's best forests according to a report by the Global Witness campaign group, were designed to allow private landowners to cut trees on their property.
Activists say that instead they are being used by companies to avoid the new, stricter forest regulation brought in when Ellen Johnson Sirleaf came to power in 2006.
The Korninga community had signed a social agreement with BODECO, one of 66 logging companies now operating in Liberia.
Two years later, the company was given a PUP logging contract by the government for more than 90,000 hectares of land. To date, the community says they have not received anything.
"I haven't seen anything like benefit from the logging company since they come here. Nothing," said Mr Kamara.
The logging company denied allegations it had not honoured the social agreement, claiming it will start grading the road once the dry season starts. As for the other promises, it said there was confusion over setting up a bank account, preventing them from processing the money.
Twenty minutes from the Kamaras' business, chiefs and elders from the Korninga chiefdom gathered in the back of a shop in Tawalata Town.
Squeezed onto wooden benches and shouting over the sound of the rain, they were angry. Some said their signatures were forged, others said they never saw the contract.
Kaifa Manjo, the main chief, wanted the government to step in. "They must not just take it [the logs] away along with our rights. Our children tomorrow, our great-grandchildren, we do not want them to suffer like we doing now," he said.
'Breakdown of law'
Timber was used to finance arms sales during Liberia's long and bloody civil war, which ended in 2003. But the West African nation still has some of the largest areas of rainforest in the region; one of the remaining biodiversity hotspots in the world packed with rare species like the pygmy hippo.

“Start Quote

What we're finding out sadly is that the community is not benefiting, the government is not getting the taxes it requires. ”
Lewis BrownLiberian Information Minister
President Sirleaf was praised for revoking the corrupt and badly managed logging contracts when she arrived in office in 2006 and drafted new forestry laws.
But the PUP, the same licence that was issued for the Korninga chiefdom, was also introduced.
In the last two years, PUPs have come to make up the majority of logging agreements in Liberia, amounting to nearly a quarter of the country's total land mass.
Unlike other logging permits, there is very little regulation of PUPs.
"It does mark an extraordinary breakdown of law in Liberia's logging sector, a sector which has received an awful lot of support since the war both from President Johnson Sirleaf and from the US, the EU and other international partners," said Jonathan Gant, a policy adviser at Global Witness.
"With that breakdown in the rule of law over the last couple of years all of that goes to waste."
In February, an order was issued suspending operations on all but four PUPs. Six months later, the number of PUPs had increased to 66.
Women go on strike
Dugbeh Forest Logging RoadThe Liberian government fears the country's rainforests - the biggest in the region - are being damaged
Each contract contains the signature of the Managing Director of the Forestry Development Authority, Moses Wogbeh, who insisted he had nothing to hide.
"It's not a breakdown in the law," Mr Wogbeh said.
"Everything that has been done has been done in keeping with the law. We have all the supporting documents. We go by the law."
He also denied new PUPs were issued after the moratorium in February.
Mr Wogbeh was suspended on Friday by order of the president herself and a full investigation into the entire PUP affair has been launched.
Information Minister Lewis Brown spoke to the BBC on behalf of Ms Sirleaf and said the president's office had been shocked by the allegations.
"We don't want to even imagine that government officials and authorities assigned specific duties would undertake to do something else. It is frankly mindboggling," he said.
He explained that PUPs were designed for non-commercial purposes; farmers with small areas of land, not 90,000 hectares like the Korninga contract.
"What we're finding out sadly is that the community is not benefiting, the government is not getting the taxes it requires.
"But more that that the guys are spreading out into the countryside and engage in massive deforestation and this was never the intention. It is a good intention gone bad," Mr Brown said.
Back in Gbarpolu county, Morris Kamara's wife, Old Lady Kamara, sitting behind huge bowls of rice and pepper, said the women of Henry Town had already decided what to do once the logging company resumes in the dry season.
"When the logging company come this time around we will strike. The women will strike. They will not pass here," she said angrily.
"Yes we will block the road - they will not pass. We have already planned this because the women are suffering here."

Thursday, 6 September 2012

genome function


Detailed map of genome function


Fergus Walsh explains the latest findings

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Scientists have published the most detailed analysis to date of the human genome.
They've discovered a far larger chunk of our genetic code is biologically active than previously thought.
The researchers hope the findings will lead to a deeper understanding of numerous diseases, which could lead to better treatments.
More than 400 scientists in 32 laboratories in the UK, US, Spain, Singapore and Japan were involved.
Their findings are published in 30 connected open-access papersappearing in three journals, Nature, Genome Biology and Genome Research.
The Encyclopedia of DNA Elements (Encode) was launched in 2003 with the goal of identifying all the functional elements within the human genome.
A pilot project looking at 1% of the genome was published in 2007.
Now the Encode project has analysed all three billion pairs of genetic code that make up our DNA.

“Start Quote

This will give researchers a whole new world to explore and ultimately, it's hoped, will lead to new treatments.”
Dr Ewan BirneyEncode
They have found 80% of our genome is performing a specific function.
Up to now, most attention has been focused on protein-coding genes, which make up just 2% of the genome.
Junk DNA
Genes are small sections of DNA that contain instructions for which chemicals - proteins - they should produce.
The Encode team analysed the vast area of the genome sometimes called "junk DNA" because it seemed to have little function and was poorly understood.
Dr Ewan Birney, of the European Bioinformatics Institute in Cambridge, who led the analysis, told me: "The term junk DNA must now be junked.
"It's clear from this research that a far bigger part of the genome is biologically active than was previously thought."
Switches
The scientists also identified four million gene "switches". These are sections of DNA that control when genes are switched on or off in cells.
They said the switches were often a long way along the genome from the gene they controlled.
dnaMore of human DNA is active than was thought
Dr Birney said: "This will help in our understanding of human biology. Many of the switches we have identified are linked to changes in risk for conditions from heart disease to diabetes or mental illness. This will give researchers a whole new world to explore and ultimately, it's hoped, will lead to new treatments."
Scientists acknowledge that it is likely to be many years before patients see tangible benefits from the project.
But another of the Encode team, Dr Ian Dunham said the data could ultimately be of help in every area of disease research.
"Encode gives us a set of very valuable leads to follow to discover key mechanisms at play in health and disease. Those can be exploited to create entirely new medicines, or to repurpose existing treatments."
Wellcome Trust Sanger Institute director Prof Mike Stratton said the results were "remarkable" and would "stand as a foundation stone for human biology for many years".
He added: "The Encode project will change the way many researchers conduct their science and give those who seek to understand disease a much better grasp of where genetic variation can affect our genome for ill."
Fergus Walsh, Medical correspondentArticle written by Fergus WalshFergus WalshMedical correspondent

Legacy for anti-doping centre

The anti-doping facility being used to test samples during the Olympic and Paralympic Games is to be turned into a medical research unit.

More on This Story

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Wednesday, 5 September 2012

outcomes impossible

who pays for the research , driving you mad
take this latest drivvle from one of the child reporters @ theBBC
Dr Crystal Smith-Spangler, the lead author of the latest review, said there were many reasons why people chose to eat organic, including animal welfare or environmental concerns.
Photo of Crystal Smith-Spangler
MagnifyCrystal Smith-Spangler, MD   Download vCardInstructor (Research), Division of General Medical Disciplines, Stanford School of Medicine and VA Palo Alto Health Care System, Center for Health Care Evaluation; Stanford Health Policy AffiliateCHP/PCOR117 Encina CommonsStanford, CA 94305-6019csmithsp@stanford.edu(650) 725-4793 (voice) 
Crystal Smith-Spangler is a practicing internist, Instructor (Research) in the Division of General Medical Disciplines in the Stanford School of Medicine, and Stanford Health Policy Affiliate. She is interested in helping patients, providers, and policy makers make informed decisions on treatment and policy options for common, costly health conditions. She uses decision analysis, cost-effectiveness analysis, meta-analysis, and observational data to understand ways to improve these decisions, focusing on cardiovascular disease and obesity. In previous work, she has examined the impact of pedometer use on weight loss and other outcomes, the strategies to reduce population sodium intake, and the financial impact of diabetes on individuals in the developing world.As a research fellow at Stanford, Smith-Spangler was recognized with the 2010 Junior Investigator Award by Annals of Internal Medicine for her article, “Population Strategies to Decrease Sodium Intake and the Burden of Cardiovascular Disease: A Cost-Effectiveness Analysis.”Smith-Spangler graduated from Duke University with a BS in Biology and minor in Health Policy, served as a Peace Corps Volunteer (Mauritania, West Africa) in health/water sanitation, and received her medical degree from the University of North Carolina, Chapel Hill. She completed her residency training in Internal Medicine at Stanford in 2008 and a Masters of Science in Health Services Research at Stanford in 2010. OTHER AFFILIATIONSVA Physician Fellow in Health Services Research and Development
Prof Alan Dangour, of the London School of Hygiene and Tropical Medicine, who carried out that work, said: "Consumers select organic foods for a variety of reasons, however this latest review identifies that at present there are no convincing differences between organic and conventional foods in nutrient content or health benefits.
"Hopefully this evidence will be useful to consumers."
LONDON SCHOOL OF HYGIENE & TROPICAL MEDICINE
INTEGRATING AGRICULTURAL AND HEALTH RESEARCH
SENIOR APPOINTMENT IN NUTRITION-SENSITIVE DEVELOPMENT
The London School of Hygiene & Tropical Medicine (LSHTM) has been awarded a £3.5m grant 
by the Leverhulme  Trust to develop an innovative programme to link agriculture and health 
research for international development in the Leverhulme Centre for Integrative Research on 
Agriculture and Health (LCIRAH). The Centre brings together research groups from six colleges 
in the  University of London, comprising economists, sociologists, anthropologists, nutritionists 
and epidemiologists to develop a programme of inter-sectoral and inter-disciplinary research, 
supported by new appointments, studentships and courses.
We are seeking to make a Senior Appointment to join the Leverhulme Centre in the arena of 
nutrition-sensitive development with a particular emphasis on inter-sectoral development 
initiatives to improve nutrition outcomes. Candidates will demonstrate expert skills and 
intellectual leadership with a particular focus on research which evaluates the impact of 
interventions and policies from a range of sectors including agriculture on nutrition and health 
outcomes. The post holder will have a strong academic research background and must be able 
to demonstrate evidence of intersectoral research that will help to build collaborations between 
LCIRAH research groups and the wider academic community.
Senior Appointment in  Nutrition-Sensitive Development, London School of  Hy