Wednesday 12 September 2012

Virgin births


Virgin births discovered in wild snakes

A female copperhead snake and her parthenogenic son (c) Charles Smith and Pam EskridgeA virgin female and her son

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Virgin births have been reported in wild vertebrates for the first time.
Researchers in the US caught pregnant females from two snake species and genetically analysed the litters.
That proved the North American pit vipers reproduced without a male, a phenomenon called facultative parthenogenesis that has previously been found only in captive species.
Scientists say the findings could change our understanding of animal reproduction and vertebrate evolution.

Single sex

Komodo dragon
It was thought to be extremely rare for a normally sexual species to reproduce asexually.
First identified in domestic chickens, such "virgin births" have been reported in recent years in a few snake, shark, lizard and bird species.
Crucially though, all such virgin births have occurred in captivity, to females kept away from males.
Virgin births in vertebrates in general have been viewed as "evolutionary novelties", said Warren Booth, from the University of Tulsa, Oklahoma, US.
Professor Booth is lead author of a paper published in the Royal Society's Biological Letters that challenges this label.
He and his collaborators investigated virgin births in wild populations of two geographically separated and long-studied species of snake.

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The frequency is what really shocked us”
Dr Warren BoothUniversity of Tulsa
They captured pregnant copperhead and cottonmouth female pit-vipers from the field, where males were present.
The snakes gave birth, allowing the scientists to study the physical and genetic characteristics of the litters.
Of the 22 copperheads, the scientists found one female that must have had a virgin birth.
Another single virgin birth occurred within the 37 cottonmouth litters.
"I think the frequency is what really shocked us," said Prof Booth.
"That's between 2.5 and 5% of litters produced in these populations may be resulting from parthenogenesis.
"That's quite remarkable for something that has been considered an evolutionary novelty," he said.
Sex or no sex
A virgin birth, or parthenogenesis, is when an egg grows and develops without being fertilised by sperm.
It results in offspring that only have their mother's genetic material; no fatherly contribution is required.
This is not uncommon in invertebrates such as aphids, bees and ants.
It also happens in a few all-female species of lizard; geckos and whiptails for example. But here it occurs across a generation; all female reproduce asexually via a process called obligate parthenogenesis.
But asexual reproduction by a normally sexual vertebrate species is still rare, having been reported in under 0.1% of species.
It was only in the mid-1990s that virgin births began to be documented in captive snakes, followed by a captive giant lizard in 2006 and a captive shark in 2007.
A whiptail lizard (c) Rolf NussbaumerAll female species, such as some whiptail lizards, reproduce asexually
To date this now includes around 10 species of snakes including a couple of boas, and a python, four species of shark, and several monitor lizards, including the endangered Komodo dragon.
Recently the zebra finch and Chinese painted quail were added to the list. All were kept in isolation in unnatural conditions and away from any males.
So to find asexual reproduction in two species of snake in the wild on their first attempt was "astounding", according to Prof Booth and his collaborators.
Virgin births should no longer be viewed as "some rare curiosity outside the mainstream of evolution," he said.
Evolutionary dead-end?
It remains unclear whether the female snakes actively select to reproduce this way, or whether the virgin births are triggered by some other factor, such as a virus or bacterial infection.
"Any answer is pure speculation at this point," says Prof Booth.
In captivity, two sharks, and three snakes, have been shown to have had multiple virgin births, producing more than one litter via facultative parthenogenesis.
As yet, it also remains unclear whether the offspring of these wild virgin births can themselves go on to have normal, or virgin births of their own.
In captive snakes studied so far, offspring have so far not been proved viable, that is capable of surviving and reproducing.
A cottonmouth pit-viper (c) Tom Spink / FlickrCottonmouth pit vipers are capable of virgin births in the wild
However, earlier this year Prof Booth and colleagues reported that a checkered gartersnake that has had consecutive virgin births, appears to have produced viable male offspring.
Parthenogenicly born copperheads and cottonmouths are also currently being raised and "in the next two to three years we will know if they are indeed viable," said Prof Booth.
"If they cannot survive and reproduce, then this is a reproductive dead-end.
"However, if they are healthy and can reproduce, that opens an entirely new avenue for research," he said.
Being able to switch from sexual to asexual reproduction could be advantageous; in the absence of males a female could still give birth and start a new, albeit inbred, population.
Her genes could still be passed on via her fertile male offspring.
Scientists believe that facultative parthenogenesis is more common in some lineages such as reptiles and sharks.
However it is unlikely that similar virgin births will be found among placental mammals, which include all the mammals aside from the platypus and echidnas.
That is because mammals require a process called genomic imprinting to reproduce, where a set of genes from one parent dominates over the other. The interaction between the two sets of parental genes is required for embryos to develop normally.

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Tuesday 11 September 2012

switch sex'


Antarctic molluscs 'switch sex'

Lissarca miliaris

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Antarctic bivalves have surprised scientists who have discovered that the animals switch sex.
The reproduction of Lissarca miliaris was studied in the 1970s and the species was first described in 1845.
But their hermaphrodite nature had remained unknown until they were studied by scientists from the National Oceanography Centre, Southampton.
Researchers suggest the molluscs could switch between the sexes to efficiently reproduce in the extremely cold ocean.

Antarctic wildlife

Sea ice in the Antarctic
The results are published in the journal Polar Biology.
"The previous reproductive study only looked at the large eggs and broods," said PhD student and lead author Adam Reed.
This earlier work showed how females brood their young for up to 18 months, from "large yolky eggs" to "fully shelled young", and found that females can support as many as 70 young inside their hinged shell.
But concentrating on reproduction at a cellular level, Mr Reed and colleagues discovered that the eggs were actually present in males.
"Curiously, we found huge numbers of very small eggs in functional males, which appear to be far higher in number than an individual could brood throughout the life of the animal," he told BBC Nature.
The team suggested that the bivalves reproduce as males while they are still in the "small" stages of development, switching to female organs once they are large enough to brood a significant number of eggs.
Eggs brooding inside a bivalve shellLissarca miliaris young develop inside the shell
"At present the traits we describe are unusual for Antarctic bivalves, but in 10 years perhaps this will be common too," said Mr Reed.
"Hermaphroditism is not necessarily uncommon in Antarctic bivalves, and with many species still to study there may be many more to describe."
Brooding meanwhile is a relatively common reproductive trait in Antarctic invertebrates and has been linked to the extreme conditions.
"Brooding is common for small bivalves and has been discussed for many years in Antarctic biology," said Mr Reed.
"Large yolky eggs that are brooded have much lower mortality than small planktonic larvae, but fewer are produced."
He explained that in extremely cold environments, development is slowed down so feeding larvae becomes a more exhaustive task.
"Brooding reduces the need for long periods of feeding", according to Mr Reed, making it a more efficient strategy for many Antarctic invertebrates including bivalves and echinoids.
Lissarca miliarisThe name bivalve comes from the Latin for 'two doors' or 'shutters', referring to the familiar hinged shell
The researcher suggested that the bivalves may be further maximising their efficiency when it comes to reproduction.
"We also found that after males become female, the male reproductive tissue persists for a long time," he said.
But for now, the bivalves can maintain their mystery because scientists are restricted to studying them during the months that staff are based at the British Antarctic Survey's remote research station.
"Perhaps they may alternate their sex so they can continue to reproduce as males while brooding their young for 18 months?" Mr Reed theorised.
"The study highlights how much we do not know about some of the common invertebrates living in the Antarctic, and how much research there is still to do."

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Monday 10 September 2012

Eskimo


Race to save Alaskan Arctic archaeology

The exquisitely preserved frozen site provides a spectacular insight into the Yup'ik Eskimo culture.
Researchers from the University of Aberdeen are using isotope analyses on recovered Eskimo hair to investigate how humans adapted to rapid climate change in the Arctic village.
The research was discussed at the British Science Festival.
The Yup'ik culture was one of the last contacted societies, but prevailed over an area three times the size of Scotland.
Dig siteAlthough very little had been known about the archaeology of their society, a team from the University of Aberdeen was brought in to help rescue thousands of artifacts that were being eroded out of the ground near the modern village of Quinhagak.
"It's probably the most spectacularly well preserved and valuable site in terms of information content I've ever seen", Dr Rick Knecht, of the University of Aberdeen, said.
"In the first couple of years we found about 7,000 pieces, including items like ivory, woven grass, incredibly well preserved animal remains, animal fur and even human hair."
But the means by which the bounty of discoveries has been released from the soil is also the reason why the site is being eradicated.
"It's preserved by permafrost, and the permafrost is melting due to climate change. As it melts, it exposes the very soft soil to marine erosion: the shoreline retreats and the sites get damaged," explained Dr Knecht, who has been working in Alaska for more than 30 years.
"This year, we were shocked by the amount of destruction. There were artifacts as big as tables thrown up on the bank by a single storm on a high tide.

Clues from climates past
"These storm periods are now lasting weeks longer because of the lack of ice cover. The sea ice cover is at a record low right now and continuing to drop, and every time that happens the site is at more at risk," the researcher told the BBC.
Doll figure
Ironically, the artifacts released by the effects of sea ice reduction may help the scientists better understand how the Yup'ik people adapted to a rapidly changing climate.
The site, known as Nunalleq, was inhabited from around AD 1350 to AD 1650, during which time the area suffered through "The Little Ice Age".
By analyzing extremely well preserved hair found at the site, the team hopes to understand how the people of Nunalleq altered their behaviour with a changing environment.
"Chemical signatures, the isotopes in your food, become present in your hair. You are what you eat," explained Dr Kate Britton, also of the University of Aberdeen.
"By analysing strands of the hair of multiple individuals, we're getting this picture of a very mixed and generalized economy incorporating salmon, caribou and other animal species.

"We can take this evidence and get an idea of what sort of changes were happening in the Bering Sea ecosystem and what sorts of changes were going on in terms of people's subsistence."
"This is in the earlier phase of the site and we're now working on the younger sites which will give us a clear idea of how the people's diet was adapting to changes in climatic conditions which would have affected species availability," she said.
Dr Knecht added: "I think we'll be looking at a story of resilience in the face of very rapid climate change."
Hair sample
As the Arctic sea ice continues to decrease today, many indigenous communities are under threat from changes in the weather, but also from changes in the abundance of subsistence food stocks such as salmon and seals.
Dr Knecht underlined how important the protection of the site was for understanding both the past and how to deal with the future.
"This isn't just an area of cultural importance, but we could also create a predictive model about what to expect in the coming decades," he said.

Sunday 9 September 2012

all new to The BBC


Desert diversity cut by 'human activities'

Desert shepherd on his camel

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Humans may be destabilising desert ecosystems across the world, according to a new study.
Analysis of the human impact on dryland ecosystems suggests it is "drastically changing" mammal communities.
The scientists believe that activities such as overgrazing livestock lie behind increasing local extinctions and a reduction in diversity.
The work will help to inform future conservation efforts, said lead author Ms Maria Veronica Chillo.
The findings are published in the Journal of Arid Environments and assess how man-made disturbances affect the role of mammals in the ecosystem.
"We report for the first time that in drylands, the effect of human-induced disturbances on mammal functional diversity is negative," said Ms Chillo, a biologist in the Biodiversity Research Group at the Argentinian Institute of Arid Lands Research.

Life in a desert

Camels sit in grassy desert
"Regardless [of] the characteristic of the disturbance, functional diversity is diminished."
The review brought together evidence from 25 studies that evaluated the effect of human-caused disturbances on mammals in arid and semi-arid lands.
A total of 110 species were included in the analysis, spanning a range of animals.
Poaching, logging, grazing, fires and introduction of invasive species were some of the ways that humans were found to have damaged mammal communities.
Although deserts and arid lands may seem to be barren places, they often support complex and fragile ecosystems in which mammals play a key role.
Some mammals dig to build nests or find food, which can bring organic material underground, enriching the soil.
Many herbivores play an important role in maintaining plant life by eating leaves and dispersing seeds.
Life in a desert can be a precarious existence for many mammals. They are constantly exposed to extreme and unpredictable environmental conditions and will be negatively impacted by anything that wipes out the resources they rely on, said Ms Chillo.
White-bellied fat-tailed mouse opossumThe White-bellied fat-tailed mouse opossum is a desert mammal found in South America that feeds mainly on insects
1/4
The "human activities" that the study suggests are most damaging mammals' role in the ecosystem were those that made fundamental changes to habitat type, such as fires or overgrazing that caused grassland to turn into shrubland.
"The most negative effect is seen when disturbances change the conditions of the system [such as something that] modifies the structure or dominant plant species," said Ms Chillo.
The team found that "old fire" from at least a year ago seemed to have a more detrimental effect than "recent fire".
Recent fires simply wipe out plants, whereas new types of vegetation colonise areas scorched by fire that happened earlier. These new plants can be more damaging to desert mammals than no plants at all.
Cars parked at desert camp in sandstormThe threat of sandstorms doesn't prevent humans disturbing desert wildlife
But the team also found that moderate grazing, while it did have a small impact on mammal diversity, had a much more limited effect.
The scientists hope to understand how humans can continue to make use of desert habitats while preserving the mammals' contribution to the ecosystem in areas such as the Monte desert in Argentina.
"The fact that livestock production [one of the main human activities in arid lands] does not represent the most aggressive human activity to mammal functional diversity opens new avenues of research."
The scientists hope that sustainable livestock production is a strategy that might help protect the biodiversity of these areas from human activities in the future.

Paralympics 2012: Oscar Pistorius powers to T44 400m gold


Paralympics 2012: Oscar Pistorius powers to T44 400m gold

South African Oscar Pistorius provided a fitting finale to the Paralympics track and field competition with gold in the last event, the T44 400m.
The 25-year-old, promoted as the face of the Games, went into the final without an individual gold but won in a new Paralympic record of 46.68 seconds.
He finished almost four seconds ahead of Blake Leeper, with fellow American David Prince taking bronze.
Pistorius also won gold in the 4x400m relay and silver in the 200m.

Analysis

"I think it's how the athletics had to end. It was perfect having Oscar Pistorius as the last event. I am pleased for him as an athlete. You could tell he felt despondent about his performances in his other events, so after all the pressure on him, it's a huge amount of relief. It was never going to be easy to do the two events (200m and 400m) back to back. I was a bit disappointed with Alan Oliveira but it proves he can't run a 400m."
Defending champion Pistorius was expected to win the race easily, although at the 200m mark it appeared that Brazil's Alan Oliveira, who stunned the South African in the 200m, might just cause another Paralympics shock.
But Pistorius pulled away from his main rival coming into the final, with 20-year-old Oliveira tying up badly in the home straight and passed by the American pair.
"It is very, very special to me," Pistorius said. "It was the last event of my season, the last event of the London 2012 Paralympic Games (at the stadium). It was just so special.
"It was the 11th time I was able to come out on the track and I just wanted to give the crowd something they could appreciate and take home with them.
"I was very nervous before today's race. I was quite tired but the crowd really kept me going.
"For the first time I was actually thinking about something beside my race coming into the home straight.
"I could hear the crowd, which was very weird and so loud. I thought 'let's just finish off on a good note'."
There was no final flourish for Great Britain's athletes in front of a capacity 80,000 crowd.
Welsh world champion javelin thrower Nathan Stephens finished 12th after two throws and a poor third effort meant a premature end to the 24-year-old's participation in the F57/58 competition.
Jarrow sprinter Hazel Robson finished seventh in the T36 100m - the 33-year-old, who has cerebral palsy, won gold in the event in Sydney.
Britain have dropped from second to third in the overall medals tablebehind Russia, which now has 35 golds to GB's 33, with Ukraine just behind on 32 and Australia on 31 ahead of the final day of competition. China are way out in front with 95 golds.
Elsewhere in the Olympic Stadium, world records fell, including in the crowd-pleasing F46 high jump final. Poland's Maciej Lepiato shattered the previous best of 2.05m with a 2.12 clearance.
Meanwhile, South Africa's Fanie van der Merwe fell over the line to take the T37 100m title. He recorded the same time as China's Liang Yongbin - a world record of 11.51 - but was given gold following a photo finish.
The athletics competition finishes on Sunday with the marathons, with GB's David Weir attempting to win a fourth gold of the Games in the men's T54 event starting at 1130 BST.

Friday 7 September 2012

logging Liberia's failed logging promises


Liberia's failed logging promises

Dugbeh Forest Logging TruckSome Liberian communities say logging companies are taking resources, but not putting anything back in

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More than 60% of Liberia's virgin rainforest has been granted to logging companies since Nobel Prize winning President, Ellen Johnson Sirleaf, came to power in 2006, according to a Global Witness report. It says the majority of these have been unregulated private contracts. Tamasin Ford reports from Liberia.
A mud road, churned into thick, gloopy soup from the heavy rains, sweeps through Henry Town in Gbarpolu county in the east of Liberia.
It is less than 150km (90 miles) from the capital, Monrovia, but without a single tar road in the county it can take up to 10 hours to reach here in the rainy season.
Old cars and rickety trucks quickly get swallowed up by the metre-high sludge, requiring hours of lifting and digging before other vehicles can pass.
Morris Kamara and his wife, Old Lady, sit on the porch of their small shop in the centre of town. An array of brightly coloured plastic containers hangs from the tin roof.
"This is my shop. As you can see I sell provisions, rubber dishes, mattresses and other things," he said proudly.
Mr Kamara went on to explain how the price of goods is expensive because of the bad roads, adding that this was one of the reasons they had wanted a logging company to operate in the region.
"Logging will bring about some development. They will help to improve the road conditions... I think it's very important for logging to be going on here," he said.
Broken promises?
The chiefdom of Korninga, where Henry Town is located, signed a social agreement with a logging company in 2009 which promised a road, a clinic, a school, land rent and even monthly salaries for the elderly.
The agreements are part of the requirements for firms to be granted a Private Use Permit (PUP).
Anthony Kamara, community activist from Korninga Chiefdom in Gbarpolu at the BODECO logging siteThe residents of Korninga hoped logging firms would bring economic and social benefits
PUPs, which now cover 40% of Liberia's best forests according to a report by the Global Witness campaign group, were designed to allow private landowners to cut trees on their property.
Activists say that instead they are being used by companies to avoid the new, stricter forest regulation brought in when Ellen Johnson Sirleaf came to power in 2006.
The Korninga community had signed a social agreement with BODECO, one of 66 logging companies now operating in Liberia.
Two years later, the company was given a PUP logging contract by the government for more than 90,000 hectares of land. To date, the community says they have not received anything.
"I haven't seen anything like benefit from the logging company since they come here. Nothing," said Mr Kamara.
The logging company denied allegations it had not honoured the social agreement, claiming it will start grading the road once the dry season starts. As for the other promises, it said there was confusion over setting up a bank account, preventing them from processing the money.
Twenty minutes from the Kamaras' business, chiefs and elders from the Korninga chiefdom gathered in the back of a shop in Tawalata Town.
Squeezed onto wooden benches and shouting over the sound of the rain, they were angry. Some said their signatures were forged, others said they never saw the contract.
Kaifa Manjo, the main chief, wanted the government to step in. "They must not just take it [the logs] away along with our rights. Our children tomorrow, our great-grandchildren, we do not want them to suffer like we doing now," he said.
'Breakdown of law'
Timber was used to finance arms sales during Liberia's long and bloody civil war, which ended in 2003. But the West African nation still has some of the largest areas of rainforest in the region; one of the remaining biodiversity hotspots in the world packed with rare species like the pygmy hippo.

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What we're finding out sadly is that the community is not benefiting, the government is not getting the taxes it requires. ”
Lewis BrownLiberian Information Minister
President Sirleaf was praised for revoking the corrupt and badly managed logging contracts when she arrived in office in 2006 and drafted new forestry laws.
But the PUP, the same licence that was issued for the Korninga chiefdom, was also introduced.
In the last two years, PUPs have come to make up the majority of logging agreements in Liberia, amounting to nearly a quarter of the country's total land mass.
Unlike other logging permits, there is very little regulation of PUPs.
"It does mark an extraordinary breakdown of law in Liberia's logging sector, a sector which has received an awful lot of support since the war both from President Johnson Sirleaf and from the US, the EU and other international partners," said Jonathan Gant, a policy adviser at Global Witness.
"With that breakdown in the rule of law over the last couple of years all of that goes to waste."
In February, an order was issued suspending operations on all but four PUPs. Six months later, the number of PUPs had increased to 66.
Women go on strike
Dugbeh Forest Logging RoadThe Liberian government fears the country's rainforests - the biggest in the region - are being damaged
Each contract contains the signature of the Managing Director of the Forestry Development Authority, Moses Wogbeh, who insisted he had nothing to hide.
"It's not a breakdown in the law," Mr Wogbeh said.
"Everything that has been done has been done in keeping with the law. We have all the supporting documents. We go by the law."
He also denied new PUPs were issued after the moratorium in February.
Mr Wogbeh was suspended on Friday by order of the president herself and a full investigation into the entire PUP affair has been launched.
Information Minister Lewis Brown spoke to the BBC on behalf of Ms Sirleaf and said the president's office had been shocked by the allegations.
"We don't want to even imagine that government officials and authorities assigned specific duties would undertake to do something else. It is frankly mindboggling," he said.
He explained that PUPs were designed for non-commercial purposes; farmers with small areas of land, not 90,000 hectares like the Korninga contract.
"What we're finding out sadly is that the community is not benefiting, the government is not getting the taxes it requires.
"But more that that the guys are spreading out into the countryside and engage in massive deforestation and this was never the intention. It is a good intention gone bad," Mr Brown said.
Back in Gbarpolu county, Morris Kamara's wife, Old Lady Kamara, sitting behind huge bowls of rice and pepper, said the women of Henry Town had already decided what to do once the logging company resumes in the dry season.
"When the logging company come this time around we will strike. The women will strike. They will not pass here," she said angrily.
"Yes we will block the road - they will not pass. We have already planned this because the women are suffering here."